Insertion junction: CLIP2.012785_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.012785
Chromosome:chromosome 1
Location:2495559
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g800047 (1 of 14) K00472 - prolyl 4-hydroxylase (E1.14.11.2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCATAGCGTGTGGAGCCATCCGGAGCTTCAGGGCCAGGCAGAGCGCGC
Internal bar code:TAGTCAAGGATTTATATAATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1264
LEAP-Seq percent confirming:63.0435
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:GGCCCTTACCCTGTTCCTTC
Suggested primer 2:GGACGTTCCTCAAGTGAGCA