Insertion junction: CLIP2.012787_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.012787
Chromosome:chromosome 5
Location:156775
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g242500 PF1,RSP4 (1 of 2) PF04712 - Radial spokehead-like protein (Radial_spoke); Radial spoke protein 4 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGAGCATGCCCACATCCACCTGTCGCTGTCTCGCAAGACCGCGCCCCT
Internal bar code:GAACTTCGTCACGGATCACATG

Confirmation - LEAP-Seq

LEAP-Seq distance:2079
LEAP-Seq percent confirming:91.4894
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:GACCTCCTGGAGACATCCCT
Suggested primer 2:TCTTGAAGGCCACCTCGAAC