Insertion junction: CLIP2.012797_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.012797
Chromosome:chromosome 7
Location:110231
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g312850 (1 of 1) PTHR31621:SF1 - DUF679 DOMAIN MEMBRANE PROTEIN 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGACATGATCACTTCGACATATGGCCCTATCCTATTGCGCCGTGCAAG
Internal bar code:GATTGTTCTCCTATAGTAGGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:5419
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:90
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:90

Suggested primers for confirmation by PCR

Suggested primer 1:TTCTTCGCGTCGTTCACAGA
Suggested primer 2:CTGGCACTGTAGACACCTGG