Insertion junction: CLIP2.012797_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.012797
Chromosome:chromosome 7
Location:110237
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g312850 (1 of 1) PTHR31621:SF1 - DUF679 DOMAIN MEMBRANE PROTEIN 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGGGATTGTTTTGCACCGTTTCTGTAACTATCGCATTTGGCACGCACA
Internal bar code:GATTGTTCTCCTATAGTAGGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1408
LEAP-Seq percent confirming:76.9231
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGCACTGTAGACACCTGG
Suggested primer 2:TTCTTCGCGTCGTTCACAGA