Insertion junction: CLIP2.012801_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.012801
Chromosome:chromosome 3
Location:2340369
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g158150 (1 of 1) K12842 - U2-associated protein SR140 (SR140) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTGACCGAGCCCCTGCCATGCCGCCCTCCTCGGTGCCGCCCGCACCGG
Internal bar code:AATTGCTTACTTATTGTAAAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1450
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TTTCGTCGATCCCGCCTATG
Suggested primer 2:GGACGAACATCTAGGCCTCG