Insertion junction: CLIP2.012803_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.012803
Chromosome:chromosome 8
Location:829289
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g361100 (1 of 11) IPR000626//IPR029071 - Ubiquitin domain // Ubiquitin-related domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGACACTGAGCATGCGGTTGTGCAAGCAACAGCGGGCCGTAATCATGC
Internal bar code:GTTGGCAAGTTTATATCGGCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:153
LEAP-Seq percent confirming:14.2857
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CCCGATCTAACCCGTACACG
Suggested primer 2:CGATCGAATGCGTGCCAATT