Insertion junction: CLIP2.012812_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.012812
Chromosome:chromosome 1
Location:4482408
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g800087 (1 of 4) 4.1.99.3 - Deoxyribodipyrimidine photo-lyase / Photoreactivating enzyme intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTGCATCTCTGAGTCTAGCCCTGCATGCTGACACCACAACGGCCTTGAT
Internal bar code:ATATAGTTTGCATCAACAGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:3194
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:ACCCGCATCTTGTTGTGCTA
Suggested primer 2:CTGGCTGTAGACCTTGGGTG