Insertion junction: CLIP2.012825_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.012825
Chromosome:chromosome 13
Location:779368
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g566900 (1 of 1) PTHR11289:SF0 - BREAST CANCER TYPE 2 SUSCEPTIBILITY PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGCGGCGCCGTCGGGGCCGTCCGCAGCCTCCATGTTGAAGAGGGAGCT
Internal bar code:TGCTTGTGCTAGGCAACGAAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3263
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:AATGTGCTTGTCTTGCGTGC
Suggested primer 2:TGCAACACGTAACCCCAGTT