Insertion junction: CLIP2.012825_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.012825
Chromosome:chromosome 13
Location:779369
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g566900 (1 of 1) PTHR11289:SF0 - BREAST CANCER TYPE 2 SUSCEPTIBILITY PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGGCGGTGTTTGTGGCGATGGCGGCGGCGGTGGAGCCGCAAAGCTGCC
Internal bar code:CAGGTTTGGGTCGCGAGGAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1784
LEAP-Seq percent confirming:97.9167
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:TGCAACACGTAACCCCAGTT
Suggested primer 2:AATGTGCTTGTCTTGCGTGC