Insertion junction: CLIP2.012828_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.012828
Chromosome:chromosome 10
Location:935096
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g424350 (1 of 1) PTHR24209:SF7 - PROTEIN DA1-RELATED 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAAATGGCACCCGGACTGTTTCAAGTGAGTGTCGGAGTGGCGGGGTTGT
Internal bar code:ACCGGCTTTGCGTGGTGTGTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:864
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGTAGCAGTCGGTGTGGT
Suggested primer 2:GCTACTATCCCCATGTGCCC