Insertion junction: CLIP2.012828_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.012828
Chromosome:chromosome 11
Location:4040662
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g480700 (1 of 2) IPR000104//IPR000945 - Antifreeze protein, type I // Dopamine beta-hydroxylase-related CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGCCAGGCCTCCAGCAGCAGCTCCACATTAGGCAACACGCCGCTGCCCG
Internal bar code:TGTAGGTTAGATCGGAAGGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1457
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TAAGTCTCTGCTTGCGTGCA
Suggested primer 2:CCTGTCTTGTGCTGTTGTGC