Insertion junction: CLIP2.012835_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.012835
Chromosome:chromosome 1
Location:7754775
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g054600 (1 of 8) IPR000157 - Toll/interleukin-1 receptor homology (TIR) domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGCAGGACAGGAGGCGGGTGGTGGGTGGCGCGGCAGCAGTGCACCGCA
Internal bar code:ATATACCACGTTAGCATGTGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1206
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGCTGGAGTGGAAGGAAT
Suggested primer 2:AGGGTTACCGGTCGTACGTA