Insertion junction: CLIP2.012836_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.012836
Chromosome:chromosome 3
Location:3388623
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g166600 DIV147 (1 of 1) PTHR13366//PTHR13366:SF0 - MALARIA ANTIGEN-RELATED // HEAT REPEAT-CONTAINING PROTEIN 6 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGACAAATACTTCAATTGTGTGCCTGAGACCGTTGCTTCATAACACTAT
Internal bar code:TGGGATCCGATGCTGGTTTCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2850
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCACACACCCCATACCAT
Suggested primer 2:GCCCGGTGACCAAACAAATC