Insertion junction: CLIP2.012843_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.012843
Chromosome:chromosome 3
Location:4049062
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g171950 PPC2,PEPC2 (1 of 2) K01595 - phosphoenolpyruvate carboxylase (ppc); Phosphoenolpyruvate carboxylase 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATAGGCCACGCTCTCCTCCTCGCTCTTTTGCTCTGGCTTCGGTTCAGTT
Internal bar code:ATCTAGGAGGTCGAGGAGGATT

Confirmation - LEAP-Seq

LEAP-Seq distance:3507
LEAP-Seq percent confirming:97.619
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:CACGGGCTTTCGTTTCGTTT
Suggested primer 2:AACCAATCCTGAGACTGGCG