Insertion junction: CLIP2.012854_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.012854
Chromosome:chromosome 12
Location:5405512
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g529301 (1 of 1) PTHR24096//PTHR24096:SF190 - FAMILY NOT NAMED // EBONY CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGCTCAAGCTGCCGCGGCGGCTCGGTTTGTGCGCGTGCAGCTGTCGGC
Internal bar code:TCAGATCCCGGTATGGGCAACA

Confirmation - LEAP-Seq

LEAP-Seq distance:979
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCTCCGTCTACCGCTAAG
Suggested primer 2:GCCGACTGTACCTGGTTTGA