Insertion junction: CLIP2.012854_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.012854
Chromosome:chromosome 12
Location:5405537
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g529301 (1 of 1) PTHR24096//PTHR24096:SF190 - FAMILY NOT NAMED // EBONY CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGATGGGAGGTGGTAACCCGGTGAGAGGCACGAGCCGGACACCCAAAC
Internal bar code:ACGTTATGTGTCAGAATGGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2553
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GCCGACTGTACCTGGTTTGA
Suggested primer 2:CTGCTCCGTCTACCGCTAAG