Insertion junction: CLIP2.012865_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.012865
Chromosome:chromosome 2
Location:599692
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g077350 HDH1 Histidinol dehydrogenase; (1 of 1) 1.1.1.23 - Histidinol dehydrogenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGGGGAGGGTGCGCTCGCCAACGGTGCGTGTGGCATGGCTACGGATGT
Internal bar code:GATGTCTTGCGAGACTACCTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:780
LEAP-Seq percent confirming:44.4444
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCTCCCTCTTTCCTTGTC
Suggested primer 2:GGACAAAGTAGGCAGCCTGT