Insertion junction: CLIP2.012866_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.012866
Chromosome:chromosome 16
Location:1096516
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g649600 PUF4 Puf protein; (1 of 1) K14790 - nucleolar protein 9 (NOP9) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGAGTATAGGACAGGGGGAGGCTAGACCGATGCAGTGTGCGTGTGTGC
Internal bar code:CTATTACGGATAATTCTTCCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1558
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:24
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCGTGTGTGTGAGAGAGA
Suggested primer 2:CGAAGTGGTTTGGTGCTTGG