Insertion junction: CLIP2.012882_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.012882
Chromosome:chromosome 13
Location:1812804
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g575101 (1 of 726) IPR011009 - Protein kinase-like domain 5'UTR
Cre13.g801523 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACAGGTAGATTCTGCTGGGGGAGGCCTTCTGAGGCGCTCCCCAGTCACC
Internal bar code:GTGTTTGTTCTGGGGTTCTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1591
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TGGCCTGTTGCTGGTAGAAG
Suggested primer 2:CAAGTGAGAGCCCTGTCGTT