Insertion junction: CLIP2.012887_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.012887
Chromosome:chromosome 6
Location:6343290
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g293051 AMT1C,AMT3 Ammonium transporter; (1 of 8) K03320 - ammonium transporter, Amt family (amt, AMT, MEP) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTACTGACGCCGTCGTCCCTGGCTACGCTCTATCTTTGCGTGGCTACAC
Internal bar code:TGAACTGTCCCGGCTTTGCCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:567
LEAP-Seq percent confirming:61.5385
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TAACCTTAGGCACTGCGTGG
Suggested primer 2:GGGAACAAGGTCAGATGGGG