Insertion junction: CLIP2.012889_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.012889
Chromosome:chromosome 6
Location:1190261
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g258300 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGAGGTGCCCCGCTCTGAGGTAGGGCTGCAGAACCAGCTGTTTCCGCA
Internal bar code:AGCGCCGTCCGGTCGGCGATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:4044
LEAP-Seq percent confirming:97.1429
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:TATGGGCGCGACATTGATCA
Suggested primer 2:CAGGTTTGTGACTGTGTGCG