Insertion junction: CLIP2.012899_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.012899
Chromosome:chromosome 11
Location:537897
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467598 (1 of 1) IPR000104//IPR013763 - Antifreeze protein, type I // Cyclin-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGACGACGTGAGCGGCGCAATCACGTGTTGCAGCCAGGATCCCAGAAC
Internal bar code:ATTGACCGGGGGTCAGCTATCT

Confirmation - LEAP-Seq

LEAP-Seq distance:544
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCTTTCCGTTGTTTGACC
Suggested primer 2:AATCCGCACCCCCATGATTT