Insertion junction: CLIP2.012902_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.012902
Chromosome:chromosome 12
Location:4951485
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g524550 (1 of 2) PTHR14614//PTHR14614:SF3 - HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGAAGAATGGTGGTTATGGCGATTCTGCACGCTAGAGGAACATGGTTGG
Internal bar code:GTCATCTGAGGCAGGGTTGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1699
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:AGACTGCTCCGTTCTTCAGC
Suggested primer 2:CATTGCTGGCTTCCGCATAC