Insertion junction: CLIP2.012905_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.012905
Chromosome:chromosome 9
Location:5508859
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g409000 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGCTCCTGCGCCTCCACCTCACCCCTTCGTGGCGGCTCACAAACCAGC
Internal bar code:CGACAGAATTTTATTGGTACCA

Confirmation - LEAP-Seq

LEAP-Seq distance:4283
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:CGACATGTAGACCGTGCGTA
Suggested primer 2:CAATCATACACGCGGCAGTG