Insertion junction: CLIP2.012911_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.012911
Chromosome:chromosome 12
Location:2884924
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g502901 (1 of 3) PF08263//PF13855 - Leucine rich repeat N-terminal domain (LRRNT_2) // Leucine rich repeat (LRR_8) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTGGACGGCAACAGCCTCAACGGCACGCTGCCTTCGGTATGGGGCTCC
Internal bar code:GCATTGTTATATGTCGCGGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:4162
LEAP-Seq percent confirming:88.5714
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:GCATAGGCCCCTGAACAGTT
Suggested primer 2:TACGACCCGCATTATCAGGC