Insertion junction: CLIP2.012921_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.012921
Chromosome:chromosome 2
Location:7954614
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g145300 (1 of 1) K15544 - RNA polymerase II subunit A C-terminal domain phosphatase SSU72 (SSU72) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCAGCCCTTAGGAGAAGCGCGTGAGCACTAACATGAGCCACTGAAGCAG
Internal bar code:ACTGGGCGATTGATGTGCTGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1966
LEAP-Seq percent confirming:89.2308
LEAP-Seq n confirming:58
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGACTACGGTTTCCACGG
Suggested primer 2:ACACACGTGTATGGCGGAAT