Insertion junction: CLIP2.012923_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.012923
Chromosome:chromosome 1
Location:5898378
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g042000 (1 of 1) PF00023//PF00612//PF13637//PF13857 - Ankyrin repeat (Ank) // IQ calmodulin-binding motif (IQ) // Ankyrin repeats (many copies) (Ank_4) // Ankyrin repeats (many copies) (Ank_5) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGTGCTGGGTGGCTGAGCAGCTGCTGAGAGCAGGCGCCGACCCAAACG
Internal bar code:TTAAACTTTGTTAATCGTATCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1095
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:ACAAGAGCTTGGAGAGGTGC
Suggested primer 2:ACCATCGCCACCAACATCAT