Insertion junction: CLIP2.012923_4

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.012923
Chromosome:chromosome 6
Location:3234107
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g276900 HTB24,HTB1 (1 of 27) K11252 - histone H2B (H2B); Histone H2B CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCAAGGCTGAGGCCAAGCCCAAGGCCGAGAAGGCCGCCAAGAAGGCCAA
Internal bar code:GTAGCGGTGTGTTAGCCGTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1615
LEAP-Seq percent confirming:21.4286
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:44
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTCAAATCCCCAAGTCCC
Suggested primer 2:CGAGTTGGGGGTTTTTGCAG