Insertion junction: CLIP2.012938_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.012938
Chromosome:chromosome 7
Location:1269390
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g322000 CSD2,NIFS2 (1 of 1) PTHR11601//PTHR11601:SF20 - CYSTEINE DESULFURYLASE // SELENOCYSTEINE LYASE; Cysteine desulfurase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGTGCATGTGGGCGGTGCTGACGGTAGCCGCCTTCGAAATTGCCACCC
Internal bar code:TTGCTGGTTCTAGTAATTCAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:617
LEAP-Seq percent confirming:27.2727
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCGCCGTAAAAGTAGTTG
Suggested primer 2:GGTCACAGTCATGCACTCCA