Insertion junction: CLIP2.012944_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.012944
Chromosome:chromosome 16
Location:6174732
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g677001 (1 of 1) PTHR31596:SF1 - T-CELL ACTIVATION INHIBITOR, MITOCHONDRIAL intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAACCCCCCTCCTTTTGGTTTGGTTTGGGCAGGTATTTGCAACCCCTCCC
Internal bar code:CTTTCTTGCGGTTAACCACCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3226
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGTTCCCACTTGGCAAAG
Suggested primer 2:TGTGGGTGTTTACGTGTGCT