Insertion junction: CLIP2.012949_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.012949
Chromosome:chromosome 4
Location:2243029
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g220350 ATPVA3 Vacuolar ATP synthase subunit A; (1 of 3) K02154 - V-type H+-transporting ATPase subunit a (ATPeV0A, ATP6N) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTGGCTAGGCATGAATGTAACCCCACCCCAACAATCCCCCTCCACTAT
Internal bar code:ATAGTGGTTATTCGGCTTTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:633
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTCAATGGAGCTGTCCTT
Suggested primer 2:CACACACTCCCATCCACCAA