Insertion junction: CLIP2.012950_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.012950
Chromosome:chromosome 17
Location:3558290
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00163178

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGGAGTGCGGCGGCAGCTCAAGTGCACGCCAGCCTCCTTACTTGAGCA
Internal bar code:CCTGATGCTGTAGCGCGAGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2618
LEAP-Seq percent confirming:19.5652
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:37
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTACTTCCCACAGGCAGT
Suggested primer 2:TGAGCTTGTCGCACGTAGTT