Insertion junction: CLIP2.012964_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.012964
Chromosome:chromosome 10
Location:2066867
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g432700 SMP10 U6 snRNA-associated Sm-like small nuclear riboprotein LSm10 (LSm2-like); (1 of 2) IPR016654 - U6 snRNA-associated Sm-like protein LSm2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGATGCCGGCAAGATGGGCATGGACACGGCTGCGGTGGGCAGTTGGGGTG
Internal bar code:GACTCAGTAAGATCCGATTAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1146
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCGGTGTCGTATCTCGTC
Suggested primer 2:CCGCCGCAAGATTTTGTCAA