Insertion junction: CLIP2.012964_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.012964
Chromosome:chromosome 10
Location:2066869
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g432700 SMP10 U6 snRNA-associated Sm-like small nuclear riboprotein LSm10 (LSm2-like); (1 of 2) IPR016654 - U6 snRNA-associated Sm-like protein LSm2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCTCTGTGTGGCTACGACCGCCACTGCGCTGCGGCTGCACGTCGCGGC
Internal bar code:GACTCAGTAAGATCCGATTAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2008
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCCGCAAGATTTTGTCAA
Suggested primer 2:ATGCGGTGTCGTATCTCGTC