Insertion junction: CLIP2.012967_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.012967
Chromosome:chromosome 1
Location:1439536
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g007651 PUS10 (1 of 1) 5.4.99.27 - tRNA pseudouridine(13) synthase / tRNA Psi(13) synthase; RNA pseudouridine synthase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTGTCAAACCGTGCGTGTCAAACCCTGCGTGTCAAACCCTGCGTGTCA
Internal bar code:TTTACCCTACGGTAATGCTTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1393
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:AGCGCGCGTGTATGTGTATA
Suggested primer 2:GCTCTTCCCATGGTTCCCAA