Insertion junction: CLIP2.012977_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.012977
Chromosome:chromosome 16
Location:1691535
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g654700 PHC61 Pherophorin-chlamydomonas homolog 61; (1 of 71) PF12499 - Pherophorin (DUF3707) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTGACCAGCGTGTCGCACTCGGCCGCCACGTCATCCGCAGTCATGGCG
Internal bar code:AGTTAGGGTTGACGTTCGCGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:4857
LEAP-Seq percent confirming:77.1429
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CGAGCTTGACTCTCAGTGCA
Suggested primer 2:TTGTGGAAGTTGACGGGGAG