Insertion junction: CLIP2.012981_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.012981
Chromosome:chromosome 16
Location:7507915
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g682251 (1 of 1) PF13414//PF14737 - TPR repeat (TPR_11) // Domain of unknown function (DUF4470) (DUF4470) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTAGCTCCCACTTGAACAGCCCCGCCACGCCGCTGGCGTCGCAGCGCA
Internal bar code:GTATAGCACCTGGGTTTCTTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1224
LEAP-Seq percent confirming:96.2963
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:TGCAGCAATGTGGCAGACTA
Suggested primer 2:GCCTCATCCCAGGAGAAACC