Insertion junction: CLIP2.012988_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.012988
Chromosome:chromosome 17
Location:2818725
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g718400 (1 of 1) IPR001810//IPR011050 - F-box domain // Pectin lyase fold/virulence factor CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCACCGCAGCTGATCATGCGCGCGGGGCTGCACAAGGACGTGCGGAAG
Internal bar code:GTAAATATGAGGTGTGCTAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:855
LEAP-Seq percent confirming:95.4545
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTCGTCGTCCTCATCACT
Suggested primer 2:GCAAAAGGAGAGCCCAGGAT