Insertion junction: CLIP2.012989_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.012989
Chromosome:chromosome 6
Location:3829843
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278177 DNL6,LIG6 (1 of 1) PTHR10459:SF44 - ANKYRIN REPEAT-CONTAINING PROTEIN; DNA ligase 6 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACCACGTTCGGCGATGGGGAAACAGCTTCGGCCGCGGCGCACAGCACG
Internal bar code:AGTGGGTCCGGGAGTTACTGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1275
LEAP-Seq percent confirming:81.8182
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:CTCAGAGCAGACAGGCACAA
Suggested primer 2:CATCTTCGCCTAGCCCCAAG