Insertion junction: CLIP2.012994_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.012994
Chromosome:chromosome 6
Location:7348411
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g299850 HLM10 (1 of 2) K11426 - SET and MYND domain-containing protein (SMYD); Histone-lysine N-methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCAATCCCATTCTCCACCGACAACACTGCACTGCCACTTCCCTTGTCGT
Internal bar code:CAGCCTCTACAGTATAAGAGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1995
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CGTATGGCCAGTAGGAGCTG
Suggested primer 2:CGCCACAATTTTGCACAGGA