Insertion junction: CLIP2.012999_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.012999
Chromosome:chromosome 6
Location:6900136
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g296750 HYDEF,HYDEF1 (1 of 1) PTHR11649//PTHR11649:SF59//PTHR22976//PTHR22976:SF28 - MSS1/TRME-RELATED GTP-BINDING PROTEIN // SUBFAMILY NOT NAMED // BIOTIN SYNTHASE // SUBFAMILY NOT NAMED; Iron hydrogenase assembly protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAATTTGTCAAGGAAAGGTTGCCGGGAGGGTAGGCGGGGAGGAAGGCGGG
Internal bar code:GTGACATTCTGATTAATTATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1929
LEAP-Seq percent confirming:96.5517
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTGCTCACACTCTCAACC
Suggested primer 2:CAGGGTTAGGTTTCCGCACT