Insertion junction: CLIP2.013005_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.013005
Chromosome:chromosome 6
Location:5164778
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g283450 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGATCTATGTACCATTTGCCCGCCTGGCGGCGTGCAGGTGGTGGCTGCAG
Internal bar code:AACTCATGTATATTGTGAAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:3175
LEAP-Seq percent confirming:97.9167
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:CATTCCCATGCCCTCCCTTT
Suggested primer 2:ATGTTAGTGCCCACTCCACG