Insertion junction: CLIP2.013012_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.013012
Chromosome:chromosome 9
Location:4611699
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g401626 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAGCCGAGAGTATCGCCCAGACACGTCTTGAGTAGCACGGGTCCTAGAG
Internal bar code:TGTCCCCCCCTCCTGGGACTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:531
LEAP-Seq percent confirming:55.5556
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTAGGACTGCCATACCTC
Suggested primer 2:CACATCCTCCAGATCCGTCG