Insertion junction: CLIP2.013017_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.013017
Chromosome:chromosome 12
Location:7242610
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g558850 (1 of 17) IPR001305 - Heat shock protein DnaJ, cysteine-rich domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGTATGGTGTCTGAGGAAATGTGCGCGTGTGTTGCACTGCCCACGCGGC
Internal bar code:GGTTATGAGTAGGAGTGTGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2998
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:CAGATATTCGGGCGCTGACT
Suggested primer 2:ACTGCGCCTGCTCTTAATGT