Insertion junction: CLIP2.013019_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.013019
Chromosome:chromosome 12
Location:6353456
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g537100 TSV,TSV2 Valyl-tRNA synthetase; (1 of 1) PTHR11946//PTHR11946:SF5 - ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES // VALYL-TRNA SYNTHETASE, ISOFORM A intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGACGTACAAAATGTACAATCACATGGTGGCAAATAAACTATAACTGC
Internal bar code:AGCCGCTAATTTTAGAGGGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1015
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TTTACCGGCAAGCAAACACG
Suggested primer 2:ATGTGTGGTGTGCAAAACGG