Insertion junction: CLIP2.013026_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.013026
Chromosome:chromosome 2
Location:3850628
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g101200 (1 of 1) PTHR23324:SF85 - CELLULAR RETINALDEHYDE-BINDING/TRIPLE FUNCTION DOMAIN-CONTAINING PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTCCACCATGTCCGCCAGGGCCGCCTCCTGCGTCGCCGTCAAGCAGCC
Internal bar code:CTTTATCAACAACGGCAGTAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1572
LEAP-Seq percent confirming:33.6735
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:65
LEAP-Seq n unique pos:98

Suggested primers for confirmation by PCR

Suggested primer 1:CCTAGACGAGACCCCTGTCA
Suggested primer 2:GGTCGGACTGTCCCTTCTTG