Insertion junction: CLIP2.013036_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.013036
Chromosome:chromosome 1
Location:2684334
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g016200 MLO4 (1 of 5) PF03094 - Mlo family (Mlo); MLO family protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTAGGATCCTAGGGCGCCACAGGAGGAGGCTGGGCGCGAGAGGTGGCCG
Internal bar code:GCGGTGTGTAAAGAGAAAGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:101
LEAP-Seq percent confirming:62.5
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CACCGTTGCACCAACTCAAG
Suggested primer 2:GTGGTGGGAAGACAGGAGTG