Insertion junction: CLIP2.013040_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.013040
Chromosome:chromosome 17
Location:6743825
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g746347 UNG1 (1 of 1) 3.2.2.27 - Uracil-DNA glycosylase / Uracil-DNA N-glycosylase; Uracil DNA glycosylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCTTCGTTTTGTTGTTTTTTTCTAACACACACACACACACACACACGCC
Internal bar code:AATGCCGGAGTGGCAGATTCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:135
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TACCGCACAACTCAACCCTC
Suggested primer 2:GCACTGCCTCTCTCGATCTC