Insertion junction: CLIP2.013043_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.013043
Chromosome:chromosome 4
Location:1169321
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g215600 (1 of 1) PTHR32183:SF6 - THIOCYANATE METHYLTRANSFERASE 1-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAAGATGAAACAGTGCCTTGGTTGCGAAAATGTGCACGAAAAGCAACTTT
Internal bar code:TTGGCATAATGGTAAATCCGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3175
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:70
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGGTGTACGGAGGTGAAA
Suggested primer 2:CATTTTGAGCAAACGCCCCA