Insertion junction: CLIP2.013049_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.013049
Chromosome:chromosome 6
Location:5110802
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGGCACAAGACACATCCGCTCCGATGAGGCGATGACCCCAGACGGGCTT
Internal bar code:CTTTATGAGGGGTTCATGCGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3052
LEAP-Seq percent confirming:99.3333
LEAP-Seq n confirming:149
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:150

Suggested primers for confirmation by PCR

Suggested primer 1:CATCCTTGCTTCCTGGTGGT
Suggested primer 2:CGAAGGTATGCGTGCGAAAG